Extracting gene pathway relations using a hybrid grammar: the Arizona Relation Parser.
Daniel McDonaldHsinchun ChenHua SuByron MarshallPublished in: Bioinform. (2004)
Keyphrases
- dependency relations
- natural language
- binary relations
- natural language parsing
- wide coverage
- phrase structure
- tree adjoining grammar
- equivalence relation
- stochastic grammar
- parse tree
- regulatory networks
- gene expression
- semantic relations
- signaling pathways
- linguistic knowledge
- natural language processing
- relation algebra
- tree bank
- microarray
- word order
- machine learning
- universal relation
- grammar rules
- dependency parsing
- semantic analysis
- multiple relations
- natural language sentences
- dependency structure
- syntactic analysis
- graph grammars
- escherichia coli
- metabolic networks
- information extraction
- state university
- dna sequences
- context free grammars