AnySeq: A High Performance Sequence Alignment Library based on Partial Evaluation.
André MüllerBertil SchmidtAndreas HildebrandtRichard MembarthRoland LeißaMatthis KruseSebastian HackPublished in: CoRR (2020)
Keyphrases
- sequence alignment
- partial evaluation
- explanation based generalization
- pairwise
- dynamic programming
- gpu accelerated
- protein sequences
- phylogenetic analysis
- binding sites
- small number
- multiple alignment
- amino acids
- domain theory
- training set
- multiple sequence alignment
- database
- domain knowledge
- expert systems
- artificial intelligence