P3S: Protein Structure Similarity Search.
Jakub GalgonekTomás SkopalDavid HokszaPublished in: Euro-Par Workshops (2012)
Keyphrases
- similarity search
- protein structure
- metric space
- protein sequences
- high dimensional
- molecular biology
- distance function
- similarity measure
- similarity searching
- high dimensional data
- indexing techniques
- secondary structure
- knn
- query processing
- similarity queries
- protein structure prediction
- vector space
- r tree
- amino acids
- amino acid sequences
- hash functions
- cross view
- efficient similarity search
- protein tertiary structure
- protein structural
- protein structure alignment
- contact map
- triangle inequality
- metric access methods
- sequence databases
- graph databases
- data sets