Relating transcription factors, modules of genes and cultivation conditions in Saccharomyces cerevisiae.
Theo A. KnijnenburgMarcel J. T. ReindersJean-Marc DaranPascale A. S. Daran-LapujadeLodewyk F. A. WesselsPublished in: CSB Workshops (2005)
Keyphrases
- saccharomyces cerevisiae
- transcription factors
- gene expression
- binding sites
- regulatory networks
- microarray
- component analysis
- dna sequences
- microarray data
- gene regulation
- transcriptional regulation
- cell cycle
- genome wide
- biological processes
- functional modules
- computational biology
- gene expression data
- co occurrence
- gene regulatory networks
- biological data
- protein protein interactions
- systems biology
- dna binding
- protein protein interaction networks
- signaling pathways
- protein interaction networks
- high throughput
- genomic data
- biomedical literature
- experimental conditions
- highly correlated
- protein complexes
- protein function
- interaction networks
- expression profiles
- gene ontology
- gene sets
- motif discovery
- gene networks
- transcription factor binding sites
- protein interaction
- statistical significance
- high dimensionality
- data sets
- sequence data
- gene selection
- computational methods
- reverse engineering
- statistical tests
- feature selection
- regulatory elements
- machine learning