HIPPIE: a high-throughput identification pipeline for promoter interacting enhancer elements.
Yih-Chii HwangChiao-Feng LinOtto ValladaresJohn MalamonPavel P. KuksaQi ZhengBrian D. GregoryLi-San WangPublished in: Bioinform. (2015)
Keyphrases
- high throughput
- mass spectrometry
- microarray
- genome wide
- biological data
- automated image analysis
- living cells
- systems biology
- mass spectrometry data
- gene expression
- protein protein interactions
- proteomic data
- dna sequencing
- genomic data
- analysis of gene expression
- image analysis
- low latency
- microarray data
- data acquisition
- biological knowledge
- transcription factors
- binding sites
- low cost