Comparing DNA Sequence Collections by Direct Comparison of Compressed Text Indexes.
Anthony J. CoxTobias JakobiGiovanna RosoneOle Schulz-TrieglaffPublished in: WABI (2012)
Keyphrases
- dna sequences
- compressed text
- pattern matching
- dna computing
- gene structure prediction
- inverted index
- information retrieval
- human genome
- document collections
- data structure
- database
- query processing
- approximate string matching
- gene prediction
- random access
- test collection
- document retrieval
- keyword search
- text mining
- natural language processing
- suffix tree
- binding sites
- search engine