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Fast Protein Structure Alignment Algorithm Based on Local Geometric Similarity.
Chan Yong Park
Sung-Hee Park
Dae-Hee Kim
Soo-Jun Park
Mankyu Sung
Hong-Ro Lee
Jung-Sub Shin
Chi-Jung Hwang
Published in:
MICAI (2006)
Keyphrases
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protein structure alignment
objective function
computational complexity
distance metric
search space
k means
np hard
optimal solution
special case
distance function
matching algorithm
path planning
space complexity
graph partitioning