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Blue Matter: Strong Scaling of Molecular Dynamics on Blue Gene/L.

Blake G. FitchAleksandr RayshubskiyMaria EleftheriouT. J. Christopher WardMark GiampapaYuriy ZhestkovMichael PitmanFrank SuitsAlan GrossfieldJed W. PiteraWilliam C. SwopeRuhong ZhouScott FellerRobert S. Germain
Published in: International Conference on Computational Science (2) (2006)
Keyphrases
  • molecular dynamics
  • high performance computing
  • scientific data
  • molecular dynamics simulations
  • protein folding
  • fluid flow
  • moving objects
  • theoretical analysis
  • limited resources
  • massively parallel