Random Forest Similarity for Protein-Protein Interaction Prediction from Multiple Sources.
Yanjun QiJudith Klein-SeetharamanZiv Bar-JosephPublished in: Pacific Symposium on Biocomputing (2005)
Keyphrases
- random forest
- multiple sources
- protein protein interactions
- protein interaction
- predicting protein
- decision trees
- feature set
- computational methods
- ensemble methods
- prediction accuracy
- functional modules
- similarity measure
- ensemble classifier
- high throughput
- gene ontology
- high precision
- multi label
- data sources
- multiple sequence alignments
- protein complexes
- secondary structure
- ppi networks
- network topology
- semantic similarity
- biological data
- protein interaction networks
- user interests
- database
- database systems
- feature selection