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Prediction of aptamer-protein interacting pairs using an ensemble classifier in combination with various protein sequence attributes.
Lina Zhang
Chengjin Zhang
Rui Gao
Runtao Yang
Qing Song
Published in:
BMC Bioinform. (2016)
Keyphrases
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protein sequences
ensemble classifier
experimentally determined
protein secondary structure
protein secondary structure prediction
protein structure
protein structure prediction
amino acids
protein classification
secondary structure
remote homology detection
protein function
ensemble learning
amino acid sequences
tertiary structure
physico chemical
ensemble methods
classification models
support vector machine
sequence analysis
protein folding
protein protein interactions
random forest
contact map
protein protein
pairwise
concept drift
amino acid composition
multiple sequence alignments
solvent accessibility
predicting protein
prediction accuracy
fusion method
structural motifs
drug design
protein complexes
data streams
protein interaction
protein structural
sequence alignment
similarity measure