Extraction of regulatory gene/protein networks from Medline.
Jasmin SaricLars Juhl JensenRossitza OuzounovaIsabel RojasPeer BorkPublished in: Bioinform. (2006)
Keyphrases
- signaling pathways
- protein protein interaction networks
- biomedical literature
- interaction networks
- systems biology
- automatic extraction
- dna binding
- gene regulatory networks
- biological networks
- regulatory networks
- cis regulatory
- protein interaction networks
- protein protein interactions
- gene regulatory
- gene networks
- saccharomyces cerevisiae
- cellular processes
- sequence alignment
- functional modules
- gene regulation
- transcription factors
- text mining
- biological entities
- network analysis
- microarray
- gene expression
- biological data
- protein interaction
- reverse engineering
- cell cycle
- homo sapiens
- transcriptional regulation
- information extraction
- genetic networks
- gene ontology
- protein sequences
- gene expression data
- statistical methods
- gene trees
- high throughput
- genetic regulatory networks
- network structure
- biological knowledge
- amino acids
- protein function
- gene prediction
- network model
- computational methods
- binding sites