Measuring semantic similarities by combining gene ontology annotations and gene co-function networks.
Jiajie PengSahra UygunTaehyong KimYadong WangSeung Y. RheeJin ChenPublished in: BMC Bioinform. (2015)
Keyphrases
- gene ontology
- semantic similarity
- microarray
- biological networks
- gene networks
- gene products
- gene clusters
- microarray expression data
- protein protein interactions
- signaling pathways
- co occurrence
- information theoretic
- gene function
- protein function
- biological pathways
- similarity measure
- gene sets
- gene expression patterns
- protein interaction
- social networks
- semantic information
- network analysis
- gene expression data
- gene expression
- wordnet
- functional modules
- high throughput
- complex networks
- network structure
- interaction networks
- biological systems
- biological data
- mutual information
- data analysis
- search engine