BioSEAL: In-Memory Biological Sequence Alignment Accelerator for Large-Scale Genomic Data.
Roman KaplanLeonid YavitsRan GinosarPublished in: SYSTOR (2020)
Keyphrases
- genomic data
- sequence alignment
- biological data
- high throughput technologies
- high throughput
- comparative genomics
- pairwise
- molecular biology
- protein protein interactions
- binding sites
- systems biology
- microarray data
- gene expression data
- data analysis
- transcription factors
- biological networks
- protein sequences
- gene expression
- dynamic programming
- statistical methods
- gene ontology
- gene clusters
- data integration
- real time
- experimental conditions
- database systems
- data mining
- databases
- amino acids
- dna sequences
- microarray
- knowledge discovery
- gene sets