Poster: Accurate scaffolding of large genomes using integer programming and Non-Serial Dynamic Programming.
James LindsayIon I. MandoiuHamed SalootiAlexander ZelikovskyPublished in: ICCABS (2012)
Keyphrases
- integer programming
- lagrangian relaxation
- dynamic programming
- linear programming
- np hard
- column generation
- ai planning
- production planning
- valid inequalities
- integer program
- network flow
- set covering
- constraint programming
- facility location
- set covering problem
- cutting plane algorithm
- inference problems
- set partitioning
- special case
- cutting plane
- sequence data
- greedy algorithm
- learning environment
- lp relaxation
- transportation problem
- sequence alignment
- linear program
- crew scheduling