MEGADOCK-GPU: Acceleration of Protein-Protein Docking Calculation on GPUs.
Takehiro ShimodaTakashi IshidaShuji SuzukiMasahito OhueYutaka AkiyamaPublished in: BCB (2013)
Keyphrases
- protein protein
- graphics processing units
- graphics hardware
- protein protein interactions
- gpu implementation
- computational methods
- protein sequences
- graphics processors
- general purpose
- parallel processing
- parallel programming
- high throughput
- interaction networks
- predicting protein
- binding sites
- protein structure
- parallel computing
- real time
- protein function
- drug design
- protein complexes
- parallel implementation
- high precision
- molecular biology
- fine grained
- computational approaches
- machine learning
- data model
- complex systems
- functional modules
- mass spectrometry
- amino acids
- biological processes
- protein interaction
- computational biology
- biological networks