Correlation Network Analysis reveals a sequential reorganization of metabolic and transcriptional states during germination and gene-metabolite relationships in developing seedlings of Arabidopsis.
Elizabeth AllenAnnick MoingTimothy M. D. EbbelsMickaël MaucourtA. Deri TomosDominique RolinMark A. HooksPublished in: BMC Syst. Biol. (2010)
Keyphrases
- network analysis
- regulatory networks
- protein protein interactions
- computational biology
- transcription factors
- social network analysis
- gene expression
- microarray
- biological networks
- systems biology
- gene regulatory networks
- complex networks
- text mining
- gene regulation
- biological processes
- gene ontology
- biological knowledge
- gene expression data
- link prediction
- biomedical literature
- network structure
- gene expression profiles
- information networks
- highly correlated
- biological systems
- community detection
- binding sites
- cellular processes
- microarray data
- saccharomyces cerevisiae
- graph theory
- dna sequences
- experimental conditions
- cell cycle
- information retrieval
- databases
- centrality measures
- data sets
- cis regulatory
- protein interaction
- gene selection
- protein sequences
- knowledge discovery
- social networks
- artificial intelligence
- learning algorithm