On the Genome Sequence Alignment FPGA Acceleration via KSW2z.
Alberto ZeniGuido Walter Di DonatoAlessia Della ValleFilippo CarloniMarco D. SantambrogioPublished in: ISCAS (2023)
Keyphrases
- sequence alignment
- phylogenetic analysis
- comparative genomics
- pairwise
- field programmable gate array
- protein sequences
- dynamic programming
- hardware implementation
- sequence analysis
- multiple alignment
- gpu accelerated
- amino acids
- real time
- high speed
- signal processing
- molecular biology
- genome sequences
- low cost
- hardware architecture
- computational biology
- evolutionary history
- sequence data
- multiple sequence alignment
- binding sites
- secondary structure
- protein structure
- data acquisition
- association rules
- data sets