VISIONET: intuitive visualisation of overlapping transcription factor networks, with applications in cardiogenic gene discovery.
Hieu T. NimMilena B. FurtadoMauro W. CostaNadia A. RosenthalHiroaki KitanoSarah E. BoydPublished in: BMC Bioinform. (2015)
Keyphrases
- transcription factors
- microarray
- gene expression
- regulatory networks
- gene regulation
- gene regulatory networks
- dna binding
- biomedical literature
- signaling pathways
- saccharomyces cerevisiae
- binding sites
- gene networks
- biological processes
- gene expression data
- gene sets
- protein protein interaction networks
- motif discovery
- systems biology
- dna sequences
- microarray data
- interaction networks
- biological networks
- cell cycle
- transcription factor binding sites
- social networks
- knowledge discovery
- genome wide
- high throughput
- complex networks
- gene ontology
- gene selection
- genomic sequences
- gene expression profiles
- component analysis
- pattern discovery
- network structure