SITEX 2.0: Projections of protein functional sites on eukaryotic genes. Extension with orthologous genes.
Irina V. MedvedevaPavel S. DemenkovVladimir A. IvanisenkoPublished in: J. Bioinform. Comput. Biol. (2017)
Keyphrases
- transcription factor binding sites
- dna sequences
- regulatory elements
- comparative genomics
- gene expression
- binding sites
- homo sapiens
- biological processes
- genomic sequences
- sequenced genomes
- dna binding
- alternative splicing
- microarray data
- gene expression data
- biological entities
- gene prediction
- transcription factors
- drosophila melanogaster
- saccharomyces cerevisiae
- sequence data
- regulatory networks
- protein protein interactions
- coding regions
- protein interaction data
- microarray
- sequence alignment
- interaction networks
- protein interaction
- gene expression profiles
- gene clusters
- gene regulation
- protein folding
- microarray datasets
- human genome
- experimental conditions
- biomedical literature
- gene ontology
- protein protein interaction networks
- gene regulatory networks
- gene selection
- protein sequences
- text mining