Nucleotide binding database NBDB - a collection of sequence motifs with specific protein-ligand interactions.
Zejun ZhengAlexander GoncearencoIgor N. BerezovskyPublished in: Nucleic Acids Res. (2016)
Keyphrases
- database
- dna binding
- binding sites
- transcription factor binding sites
- dna sequences
- genome sequences
- protein data bank
- protein protein
- amino acids
- protein coding regions
- protein sequences
- sequence databases
- biological sequences
- sequence alignment
- sequence data
- sequence analysis
- rna sequences
- protein structure
- secondary structure
- genomic sequences
- databases
- transcription factors
- drug design
- protein protein interactions
- database systems
- amino acid residues
- protein families
- predicting protein
- virtual screening
- gene expression
- protein interaction
- amino acid sequences
- regulatory elements
- motif discovery
- computational methods
- high throughput
- genome wide
- multiple sequence alignment
- protein structure prediction
- interaction networks
- transcriptional regulation
- human genome