RGmatch: matching genomic regions to proximal genes in omics data integration.
Pedro Furió-TaríAna ConesaSonia TarazonaPublished in: BMC Bioinform. (2016)
Keyphrases
- data integration
- genomic data
- protein coding regions
- transcription factor binding sites
- schema matching
- entity resolution
- data exchange
- data sources
- data model
- data management
- dna sequences
- data cleaning
- data warehouse
- biological data
- databases
- coding regions
- genomic sequences
- data transformation
- query answering
- biological databases
- heterogeneous data sources
- schema mappings
- genome sequences
- high throughput sequencing
- gene expression
- human genome
- high throughput
- copy number
- query decomposition
- life sciences
- microarray data
- comparative genomics
- water resources management
- data extraction
- heterogeneous data
- ontology alignment
- transcription factors
- binding sites
- integrity constraints
- scientific data management
- case study
- real world
- data sets