SUPFAM - a database of potential protein superfamily relationships derived by comparing sequence-based and structure-based families: implications for structural genomics and function annotation in genomes.
Shashi B. PanditDilip GosarS. AbhimanS. SujathaSayali S. DixitNatasha S. MhatreRamanathan SowdhaminiNarayanaswamy SrinivasanPublished in: Nucleic Acids Res. (2002)
Keyphrases
- sequence analysis
- protein structural
- database
- sequence similarity
- protein sequences
- sequence data
- psi blast
- protein structure
- protein families
- sequence alignment
- structural information
- computational biology
- metadata
- experimentally determined
- databases
- remote homology detection
- genomic sequences
- sequence databases
- amino acid sequences
- structural analysis
- structural models
- structural features
- relational databases
- database systems
- protein structure prediction
- genome sequences
- structural patterns
- structural similarities
- computational methods
- rna secondary structures
- multiple sequence alignments
- network structure