PIM-Aligner: A Processing-in-MRAM Platform for Biological Sequence Alignment.
Shaahin AngiziJiao SunWei ZhangDeliang FanPublished in: DATE (2020)
Keyphrases
- sequence alignment
- design considerations
- pairwise
- real time
- comparative genomics
- platform independent
- protein sequences
- dynamic programming
- amino acids
- gpu accelerated
- biological data
- molecular biology
- data sets
- central processor
- protein structure prediction
- multiple sequence alignment
- processing units
- binding sites
- biological systems
- phylogenetic analysis
- machine learning