Prediction of Protein Structural Classes for Low-Similarity Sequences Based on Consensus Sequence and Segmented PSSM.
Yunyun LiangSanyang LiuShengli ZhangPublished in: Comput. Math. Methods Medicine (2015)
Keyphrases
- protein structural
- fold recognition
- psi blast
- sequence analysis
- protein sequences
- secondary structure
- sequence similarity
- protein structure
- protein secondary structure prediction
- protein structure prediction
- multiple sequence alignments
- sequence alignment
- biological sequences
- tertiary structure
- computational biology
- similarity measure
- sequence databases
- sequence data
- amino acids
- amino acid sequences
- rna sequences
- longest common subsequence
- contact map
- protein classification
- genome sequences
- molecular biology
- computational methods
- hidden markov models
- similarity measurement
- protein function
- semantic similarity
- sequential patterns
- temporal order
- sequence matching
- euclidean distance
- machine learning
- pairwise