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SWAP-Assembler 2: Optimization of De Novo Genome Assembler at Extreme Scale.
Jintao Meng
Sangmin Seo
Pavan Balaji
Yanjie Wei
Bingqiang Wang
Shengzhong Feng
Published in:
ICPP (2016)
Keyphrases
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human genome
sequence data
genomic sequences
optimization problems
scale space
combinatorial optimization
global optimization
data sets
optimization algorithm
genotype phenotype
assembly process
optimization strategies
sequence analysis
optimization process
pairwise
search algorithm
learning algorithm