Sequence alignment kernel for recognition of promoter regions.
Leo GordonAlexey Ya. ChervonenkisAlex J. GammermanIlham A. ShahmuradovVictor V. SolovyevPublished in: Bioinform. (2003)
Keyphrases
- sequence alignment
- binding sites
- transcription factor binding sites
- pairwise
- recognition rate
- object recognition
- dynamic programming
- protein sequences
- computational biology
- multiple sequence alignment
- kernel function
- sequence data
- amino acids
- feature extraction
- feature space
- recognition algorithm
- gene expression
- image features
- transcription factors
- biological sequences
- gpu accelerated
- objects in cluttered scenes
- machine learning
- phylogenetic analysis