A randomized algorithm for aligning DNA sequences to reference genomes.
Nam S. VoQuang TranNobal B. NiraulaVinhthuy PhanPublished in: ICCABS (2013)
Keyphrases
- dna sequences
- randomized algorithm
- human genome
- genomic sequences
- regulatory elements
- coding regions
- protein coding regions
- nucleotide sequences
- greedy algorithm
- lower bound
- tandem repeats
- dna computing
- protein families
- sequence patterns
- binding sites
- motif discovery
- gene structure prediction
- perceptron algorithm
- genomic data
- biological sequences
- rna sequences
- np hard
- transcription factors
- genome sequences
- sequence data
- objective function