BioShell-Threading: versatile Monte Carlo package for protein 3D threading.
Pawel GniewekAndrzej KolinskiAndrzej KloczkowskiDominik GrontPublished in: BMC Bioinform. (2014)
Keyphrases
- monte carlo
- protein structure prediction
- markov chain
- monte carlo simulation
- importance sampling
- monte carlo methods
- protein structure
- monte carlo tree search
- particle filter
- simulation study
- protein sequences
- stochastic approximation
- monte carlo method
- adaptive sampling
- markovian decision
- global illumination
- optimal strategy
- variance reduction
- computational cost
- function approximation
- dynamical systems
- uct algorithm
- state space