Comparing the performance of clusters, Hadoop, and Active Disks on microarray correlation computations.
Jeffrey A. DelmericoNathanial A. ByrnesAndrew E. BrunoMatthew D. JonesSteven M. GalloVipin ChaudharyPublished in: HiPC (2009)
Keyphrases
- microarray
- gene expression
- high throughput
- gene expression data
- microarray data
- gene ontology
- gene clusters
- high dimensionality
- clustering algorithm
- gene expression analysis
- gene selection
- gene expression profiles
- gene expression profiling
- experimental conditions
- highly correlated
- gene networks
- cluster analysis
- molecular biology
- dna microarray
- data points
- gene expression data sets
- cancer classification
- colon cancer
- hierarchical clustering
- data clustering
- microarray data analysis
- gene expression datasets
- clustering analysis
- yeast cell cycle
- analysis of gene expression
- microarray expression data
- data mining
- regulatory networks
- machine learning
- microarray images
- microarray datasets
- differentially expressed genes
- fuzzy clustering
- self organizing maps
- image processing
- data sets
- gene expression microarray data