Reconfigurable acceleration of genetic sequence alignment: A survey of two decades of efforts.

Ho-Cheung Ng Shuanglong Liu Wayne Luk

Published in: FPL (2017)

Keyphrases

sequence alignment
pairwise
protein sequences
dynamic programming
binding sites
low cost
genetic algorithm
multiple alignment
amino acids
gpu accelerated
reconfigurable architecture
phylogenetic analysis
hardware implementation
computational biology
multiple sequence alignment
comparative genomics