Design of multiple sequence alignment algorithms on parallel, distributed memory supercomputers.
Philip C. ChurchAndrzej GoscinskiKathryn E. HoltMichael InouyeAmol GhotingKonstantin MakarychevMatthias ReumannPublished in: EMBC (2011)
Keyphrases
- distributed memory
- shared memory
- multiprocessor systems
- matrix multiplication
- single processor
- parallel computers
- multiple sequence alignment
- parallel implementation
- parallel machines
- parallel architectures
- parallel architecture
- ibm sp
- multiple alignment
- message passing
- parallel programming
- memory efficient
- parallel computing
- data parallelism
- orders of magnitude
- computational complexity