MADOKA: an ultra-fast approach for large-scale protein structure similarity searching.
Lei DengGuolun ZhongChenzhe LiuJudong LuoHui LiuPublished in: BMC Bioinform. (2019)
Keyphrases
- protein structure
- similarity searching
- similarity search
- protein sequences
- molecular biology
- metric space
- secondary structure
- protein structure prediction
- access methods
- protein tertiary structure
- amino acids
- amino acid sequences
- protein structural
- contact map
- protein structure alignment
- search tools
- similarity queries
- relational databases
- nuclear magnetic resonance
- machine learning