Continuous time boolean modeling for biological signaling: application of Gillespie algorithm.
Gautier StollEric ViaraEmmanuel BarillotLaurence CalzonePublished in: BMC Syst. Biol. (2012)
Keyphrases
- learning algorithm
- times faster
- objective function
- computational complexity
- theoretical analysis
- experimental evaluation
- improved algorithm
- k means
- optimization algorithm
- dynamic programming
- computationally efficient
- similarity measure
- selection algorithm
- detection algorithm
- expectation maximization
- high accuracy
- worst case
- computational cost
- np hard
- significant improvement
- search space
- optimal solution
- linear programming
- input data
- probabilistic model
- cost function
- real valued
- lower bound