Evaluating contributions of natural language parsers to protein-protein interaction extraction.
Yusuke MiyaoKenji SagaeRune SætreTakuya MatsuzakiJun'ichi TsujiiPublished in: Bioinform. (2009)
Keyphrases
- protein protein interactions
- natural language
- natural language processing
- computational approaches
- information extraction
- predicting protein protein interactions
- computational methods
- functional modules
- protein interaction
- predicting protein
- high throughput
- protein complexes
- biological processes
- biological data
- ppi networks
- biological networks
- high precision
- machine learning
- gene ontology
- biomedical literature
- systems biology
- knowledge representation
- genomic data
- network topology
- structural properties
- protein interaction data
- secondary structure
- protein interaction networks
- automatic extraction
- network analysis
- wireless sensor networks
- information retrieval