A multi-tool recipe to identify regions of protein-DNA binding and their influence on associated gene expression.
Daniel E. CarlinKassi KosnickiSara GaramszegiTrey IdekerHelga ThorvaldsdóttirMichael ReichJill P. MesirovPublished in: F1000Research (2017)
Keyphrases
- dna binding
- gene expression
- binding sites
- transcription factors
- transcription factor binding sites
- genome wide
- microarray
- biological processes
- protein interaction
- dna sequences
- gene expression data
- motif discovery
- regulatory networks
- gene expression patterns
- high throughput
- saccharomyces cerevisiae
- co occurrence
- biological sequences
- microarray data
- gene regulation
- regulatory elements