A new version of the ANDSystem tool for automatic extraction of knowledge from scientific publications with expanded functionality for reconstruction of associative gene networks by considering tissue-specific gene expression.
Vladimir A. IvanisenkoPavel S. DemenkovTimofey V. IvanisenkoElena L. MishchenkoOlga V. SaikPublished in: BMC Bioinform. (2019)
Keyphrases
- automatic extraction
- gene expression
- microarray
- gene networks
- gene expression data
- microarray data
- scientific publications
- gene expression profiles
- high throughput
- gene selection
- gene ontology
- knowledge base
- high dimensionality
- gene regulatory networks
- knowledge discovery
- experimental conditions
- biological networks
- knowledge representation
- molecular biology
- feature selection
- biomedical literature
- information retrieval
- social networks
- binding sites
- query language
- social network analysis
- software engineering
- transcription factors
- machine learning
- data sets