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An Algorithm for Finding Conserved Secondary Structure Motifs in Unaligned RNA Sequences.
Giulio Pavesi
Giancarlo Mauri
Graziano Pesole
Published in:
J. Comput. Sci. Technol. (2004)
Keyphrases
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rna sequences
rna secondary structure prediction
secondary structure
rna secondary structures
dna sequences
free energy
protein sequences
k means
similarity measure
motif discovery
dynamic programming
molecular biology
amino acids
amino acid sequences
edit distance
motif finding
neural network