Transitive closure and metric inequality of weighted graphs: detecting protein interaction modules using cliques.
Chris H. Q. DingXiaofeng HeHui XiongHanchuan PengStephen R. HolbrookPublished in: Int. J. Data Min. Bioinform. (2006)
Keyphrases
- transitive closure
- weighted graph
- functional modules
- protein interaction
- protein protein interactions
- expressive power
- computational methods
- query language
- query evaluation
- shortest path
- first order logic
- gene expression
- graph structure
- directed acyclic graph
- biological networks
- gene ontology
- relational algebra
- spatial databases
- biological data
- data objects
- binding sites
- databases
- distance function
- co occurrence
- biomedical literature
- data analysis
- similarity measure