Bios2mds: an R package for comparing orthologous protein families by metric multidimensional scaling.
Julien PeléJean-Michel BécuHervé AbdiMarie ChabbertPublished in: BMC Bioinform. (2012)
Keyphrases
- multidimensional scaling
- protein families
- euclidean distance
- dna sequences
- geodesic distance
- low dimensional
- binding sites
- dimensionality reduction
- vector space
- cluster analysis
- kernel pca
- principal component analysis
- high dimensional
- distance metric
- protein sequences
- distance measure
- data mining
- metric space
- manifold learning
- feature vectors