Parallel stepwise stochastic simulation: harnessing GPUs to explore possible futures states of a chromosome folding model thanks to the possible futures algorithm (PFA).
Jonathan Passerat-PalmbachJonathan CauxYannick Le PennecRomain ReuillonIvan JunierFrançois KépèsDavid R. C. HillPublished in: SIGSIM-PADS (2013)
Keyphrases
- stochastic simulation
- probabilistic model
- mathematical model
- computational model
- learning algorithm
- state variables
- optimal solution
- computational complexity
- dynamic programming
- bayesian analysis
- expectation maximization
- energy function
- network model
- high order
- image processing
- dynamic systems
- computational models
- experimental data
- genetic algorithm
- search space
- pairwise