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Tree Decomposition Based Fast Search of RNA Structures Including Pseudoknots in Genomes.
Yinglei Song
Chunmei Liu
Russell L. Malmberg
Fangfang Pan
Liming Cai
Published in:
CSB (2005)
Keyphrases
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rna structures
tree decomposition
long range
search algorithm
rna secondary structures
search space
decomposition method
branch and bound
constraint networks
genome wide
secondary structure
high throughput
decomposition methods