On the Near-Linear Correlation of the Eigenvalues Across BLOSUM Matrices.
Jin LiYen Kaow NgXingwu LiuShuai Cheng LiPublished in: ISBRA (2015)
Keyphrases
- linear correlation
- amino acids
- sequence alignment
- eigenvalues and eigenvectors
- singular value decomposition
- symmetric matrices
- correlation matrix
- covariance matrices
- singular values
- covariance matrix
- protein sequences
- eigendecomposition
- secondary structure
- dynamic programming
- adjacency matrix
- maximum likelihood
- principal component analysis
- data sets
- principal components
- pairwise comparison
- original data
- protein structure
- data matrix
- linear complementarity problem
- sparse matrix
- clustering algorithm