Triplex: an R/Bioconductor package for identification and visualization of potential intramolecular triplex patterns in DNA sequences.
Jirí HonTomás MartínekKamil RajdlMatej LexaPublished in: Bioinform. (2013)
Keyphrases
- dna sequences
- sequence patterns
- dna computing
- nucleotide sequences
- dna sequencing
- transcription factor binding sites
- tandem repeats
- binding sites
- motif discovery
- single nucleotide polymorphisms
- biological sequences
- human genome
- data analysis
- genomic sequences
- interesting patterns
- data mining techniques
- data mining
- sequential pattern mining
- pattern mining
- sequential patterns
- self organizing maps
- frequent patterns
- coding regions
- knowledge discovery
- data model
- problems in computational biology