Large Scale Protein Sequence Alignment Using FPGA Reprogrammable Logic Devices.
Stefan DydelPiotr BalaPublished in: FPL (2004)
Keyphrases
- protein sequences
- multiple sequence alignment
- multiple alignment
- sequence alignment
- computational biology
- multiple sequence alignments
- amino acids
- secondary structure
- biological sequences
- rna sequences
- protein structure
- protein secondary structure
- protein classification
- protein structure and function
- protein function
- structural motifs
- sequence analysis
- protein structure prediction
- high speed
- protein folding
- psi blast
- amino acid sequences
- pairwise
- computational approaches
- reconfigurable hardware
- coarse grained
- protein structural
- remote homology detection
- low cost
- protein protein
- physico chemical
- amino acid composition