A Fuzzy Viterbi Algorithm for Improved Sequence Alignment and Searching of Proteins.
Niranjan P. BidargaddiMadhu ChettyJoarder KamruzzamanPublished in: EvoWorkshops (2005)
Keyphrases
- sequence alignment
- viterbi algorithm
- dynamic programming
- amino acids
- protein sequences
- multiple sequence alignment
- hidden markov models
- protein structure prediction
- protein function
- protein structure
- protein classification
- markov model
- pairwise
- sequence databases
- fuzzy logic
- n gram
- amino acid sequences
- multiple alignment
- computational biology
- phylogenetic analysis
- biological sequences
- statistical tests
- binding sites
- comparative genomics
- psi blast