sAMPpred-GAT: prediction of antimicrobial peptide by graph attention network and predicted peptide structure.
Ke YanHongwu LvYichen GuoWei PengBin LiuPublished in: Bioinform. (2023)
Keyphrases
- amino acids
- network structure
- amino acid residues
- graph structure
- graph representation
- tandem mass spectra
- graphical representation
- prediction accuracy
- bipartite graph
- network model
- protein classification
- random graphs
- spanning tree
- dynamic networks
- elman network
- fully connected
- radial basis function network
- wireless sensor networks
- structural properties
- network traffic
- neural network
- graph theory
- link prediction
- small world
- major histocompatibility complex
- mass spectrometry
- peer to peer
- structured data
- tandem mass
- weighted graph
- random walk
- network properties
- tree structure
- complex networks
- directed graph
- visual attention