Hybrid MPI/OpenMP Strategy for Biological Multiple Sequence Alignment with DIALIGN-TX in Heterogeneous Multicore Clusters.
Emerson de Araujo MacedoAlba Cristina Magalhaes Alves de MeloGerson Henrique PfitscherAzzedine BoukerchePublished in: IPDPS Workshops (2011)
Keyphrases
- shared memory
- multiple sequence alignment
- parallel programming
- high performance computing
- parallel algorithm
- message passing
- computational biology
- parallel computing
- molecular biology
- protein sequences
- memory efficient
- clustering algorithm
- biological sequences
- parallel execution
- massively parallel
- genetic algorithm
- secondary structure
- cluster analysis
- neural network
- parallel implementation
- biological data
- multi dimensional
- message passing interface
- multiple alignment