Improving Residue-Residue Contacts Prediction from Protein Sequences Using RNN-Based LSTM Network.
Wenjing ChenJianfeng SunChunhui GaoPublished in: ICMLC (2019)
Keyphrases
- protein sequences
- protein structure prediction
- amino acids
- contact map
- protein structure
- recurrent neural networks
- solvent accessibility
- computational biology
- protein secondary structure
- secondary structure
- tertiary structure
- amino acid sequences
- protein function
- protein classification
- multiple sequence alignments
- physicochemical properties
- biological sequences
- coarse grained
- experimentally determined
- protein folding
- protein structure and function
- long short term memory
- complex networks
- neural network
- multiple sequence alignment
- sequence alignment
- molecular biology
- network structure
- nearest neighbor
- sequence analysis
- sequence databases
- interaction networks
- network analysis
- feed forward
- back propagation
- prediction accuracy