A software tool for finding locally optimal alignments in protein and nucleic acid sequences.
J. D. HallEugene W. MyersPublished in: Comput. Appl. Biosci. (1988)
Keyphrases
- locally optimal
- sequence alignment
- multiple sequence alignment
- globally optimal
- dynamic programming
- protein sequences
- pairwise
- multiple sequence alignments
- global alignment
- multiple alignment
- biological sequences
- amino acids
- genetic algorithm
- sequence analysis
- memory efficient
- hidden markov models
- protein structure
- machine learning
- physico chemical
- secondary structure
- sequence similarity
- sequential patterns