OpenCL for HPC with FPGAs: Case study in molecular electrostatics.
Chen YangJiayi ShengRushi PatelAhmed SanaullahVipin SachdevaMartin C. HerbordtPublished in: HPEC (2017)
Keyphrases
- parallel algorithm
- case study
- message passing interface
- high performance computing
- shared memory
- parallel programming
- molecular dynamics
- hardware software
- fault tolerance
- lessons learned
- scientific computing
- field programmable gate array
- knowledge management
- parallel architectures
- three dimensional
- massively parallel
- fpga implementation
- address space
- molecular structure
- drug discovery
- reconfigurable hardware
- molecular structures
- dna computing
- real world
- parallel computing
- embedded systems
- computing environments
- response time
- software development